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I understand exactly what you are going through here. Part of the main problem is that you set imageready to cut the whole lot up at once, so its created a source HTML file that tries to maintain the aspect ratio of all the individual components. You *can* reverse this by looking at the html and manually editing all the dimensions, making sure that it uses as few relational % heights/widths as possible, OR you can go for the more sensible option and cut it a little differently. By this, I mean that you should cut in terms of bulk sections (i.e. side, mainbit, header, etc), and then cut AGAIN for the mini-sections in these bulk sections and add them in individually (i.e. the shoutbox, navigation buttons, etc).
Its a little hard to explain, so please tell me if you are confused and i'll create a little diagram or something...
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